skills-hub

npx skills add BioTender-max/awesome-bio-agent-skills --skill skills-hub --agent claude-code

Same command for any agent — swap --agent for codex, cursor, copilot.

# Skills Hub Browser Search, browse, and install community-contributed skills from the [BioClaw Skills Hub](https://github.com/zongtingwei/Bioclaw_Skills_Hub). The Hub contains 70+ specialized bioinformatics skills organized into domains. Skills downloaded from the Hub are cached locally so they persist for the rest of the session. ## When to Use - User requests an analysis not covered by the built-in skills listed in your system prompt - User asks "what other skills are available" or "do you have a skill for X" - User needs a specialized pipeline (e.g., protein design, EHR analysis, spatial transcriptomics workflows beyond the built-in) ## Hub Structure The Hub organizes skills into these domains: | Domain | Examples | |--------|----------| | `core-bioinformatics` | alignment-and-mapping, read-qc, sequence-io, database-access | | `transcriptomics` | bulk-rna-expression, differential-expression | | `single-cell-and-spatial` | scrna-preprocessing, spatial-transcriptomics, cell-annotation | | `epigenomics-and-regulation` | atac-seq, chip-seq, dna-methylation | | `genomics-and-variation` | variant-calling, genome-assembly, long-read-genomics | | `metagenomics-and-microbiome` | metagen

curl -sL "https://raw.githubusercontent.com/zongtingwei/Bioclaw_Skills_Hub/main/catalog/taxonomy.yaml"
curl -sL "https://api.github.com/repos/zongtingwei/Bioclaw_Skills_Hub/contents/skills/<domain>" | python3 -c "
import json, sys
for item in json.load(sys.stdin):
if item['type'] == 'dir':
Download the SKILL.md
mkdir -p "${CACHE_DIR}"
curl -sL "https://raw.githubusercontent.com/zongtingwei/Bioclaw_Skills_Hub/main/skills/${DOMAIN}/${SKILL}/SKILL.md" \
pip install <package> --quiet 2>/dev/null