sec-report

npx skills add BioTender-max/awesome-bio-agent-skills --skill sec-report --agent claude-code

Same command for any agent — swap --agent for codex, cursor, copilot.

# SEC Chromatography Analysis & PDF Report Generator > **CRITICAL: This skill provides a fully automated pipeline script (`sec_pipeline.py`) that produces a publication-quality PDF with text, tables, figures, and analysis. You MUST use this pipeline. Do NOT write your own analysis script. Do NOT generate figures without accompanying text. Do NOT produce a PDF that only contains images — the pipeline generates a complete scientific report with Background, Methods, Results (including text interpretation for each construct), Discussion, and Conclusions sections.** > **If you write your own code instead of running `sec_pipeline.py`, the report will be of significantly lower quality. The pipeline includes a professional Typst template engine that generates reports comparable to Biomni/Phylo output quality.** Analyze SEC chromatogram data files and images, detect peaks, classify oligomeric states, and generate a publication-quality PDF report with professional styling (colored section bands, styled tables, callout boxes, page headers/footers, and full-text analysis for every section). ## When To Use This Skill - User uploads SEC chromatogram data (CSV/TSV/Excel) and/or images - User asks

pip install typst 2>/dev/null || pip install --user typst
pip install fpdf2 2>/dev/null || pip install --user fpdf2
cd /home/node/.claude/skills/sec-report
python3 sec_pipeline.py \