metaphlan-profiler
MetaPhlAn metagenomic profiling skill for species-level community composition
Profile →npx skills add a5c-ai/babysitter --skill metaphlan-profiler --agent claude-code
Same command for any agent — swap --agent for codex, cursor, copilot.
Weekly change comes from our own snapshots, not the repository page — it measures attention, not adoption.
# MetaPhlAn Profiler Skill ## Purpose Enable MetaPhlAn metagenomic profiling for species-level community composition. ## Capabilities - Clade-specific marker gene analysis - Species-level quantification - Strain-level profiling (StrainPhlAn) - Unknown species estimation - Multi-sample heatmaps - Comparative analysis ## Usage Guidelines - Use latest marker database - Profile at species level for most analyses - Apply strain-level analysis when relevant - Visualize community composition - Compare across samples and conditions - Document database versions ## Dependencies - MetaPhlAn4 - StrainPhlAn - mOTUs ## Process Integration - Shotgun Metagenomics Pipeline (shotgun-metagenomics)
- Purpose
- Capabilities
- Usage Guidelines
- Dependencies
- Process Integration
What does the metaphlan-profiler skill do?
MetaPhlAn metagenomic profiling skill for species-level community composition
How do I install it?
Run `npx skills add a5c-ai/babysitter --skill metaphlan-profiler --agent claude-code` — it drops the skill into your project so the agent can pick it up. Swap the --agent value for codex, cursor or copilot if you use one of those.
Where does this skill come from?
From a5c-ai/babysitter, a repository with 1,642 stars. We read it straight from the repository tree rather than a submitted listing, so what you see here is what is actually published.
Is a popular skill a good skill?
Not necessarily. Stars measure attention, not adoption — a repository can trend for a week and be abandoned. That is why we show the weekly change from our own snapshots next to the total, instead of a single flattering number.