metabolicinput
Pass-through process that prepares Seurat object for metabolic landscape analysis. Routes the processed Seurat object to downstream metabolic analysis processes (MetabolicExprImputation, MetabolicPathwayActivity, MetabolicFeatures, MetabolicPathwayHeterogeneity).
npx skills add majiayu000/claude-skill-registry --skill metabolicinput-pwwang-immunopipe-be5747be --agent claude-code
Same command for any agent — swap --agent for codex, cursor, copilot.
Weekly change comes from our own snapshots, not the repository page — it measures attention, not adoption.
--- name: metabolicinput description: Pass-through process that prepares Seurat object for metabolic landscape analysis. Routes the processed Seurat object to downstream metabolic analysis processes (MetabolicExprImputation, MetabolicPathwayActivity, MetabolicFeatures, MetabolicPathwayHeterogeneity). **Note**: This process requires no direct configuration. --- # MetabolicInput Process Configuration ## Purpose Pass-through process that prepares Seurat object for metabolic landscape analysis. Routes the processed Seurat object to downstream metabolic analysis processes (MetabolicExprImputation, MetabolicPathwayActivity, MetabolicFeatures, MetabolicPathwayHeterogeneity). **Note**: This process requires no direct configuration. All metabolic analysis parameters are configured at the ScrnaMetabolicLandscape group level. ## When to Use - First step in modular metabolic analysis workflow - When you want to perform metabolic pathway analysis on single-cell RNA-seq data - Alternative to ScrnaMetabolicLandscape (same group, modular approach) - After clustering is complete (SeuratClustering or related processes) - When investigating metabolic heterogeneity across cell types or conditions ## C
- Purpose
- When to Use
- Configuration Structure
- Process Enablement
- Input Specification
- Environment Variables (Group Level)
- Metabolic Pathway Databases
- Available Databases (via enrichit)
- Database Descriptions
- Species-Specific Considerations
- Configuration Examples
- Minimal Configuration (Default KEGG)
- KEGG Human Pathways (Explicit)
- Reactome Pathways
What does the metabolicinput skill do?
Pass-through process that prepares Seurat object for metabolic landscape analysis. Routes the processed Seurat object to downstream metabolic analysis processes (MetabolicExprImputation, MetabolicPathwayActivity, MetabolicFeatures, MetabolicPathwayHeterogeneity).
How do I install it?
Run `npx skills add majiayu000/claude-skill-registry --skill metabolicinput-pwwang-immunopipe-be5747be --agent claude-code` — it drops the skill into your project so the agent can pick it up. Swap the --agent value for codex, cursor or copilot if you use one of those.
Where does this skill come from?
From majiayu000/claude-skill-registry, a repository with 534 stars. We read it straight from the repository tree rather than a submitted listing, so what you see here is what is actually published.
Is a popular skill a good skill?
Not necessarily. Stars measure attention, not adoption — a repository can trend for a week and be abandoned. That is why we show the weekly change from our own snapshots next to the total, instead of a single flattering number.