hpo-phenotype-matcher
Human Phenotype Ontology skill for phenotype-driven gene prioritization
npx skills add a5c-ai/babysitter --skill hpo-phenotype-matcher --agent claude-code
Same command for any agent — swap --agent for codex, cursor, copilot.
Weekly change comes from our own snapshots, not the repository page — it measures attention, not adoption.
# HPO Phenotype Matcher Skill ## Purpose Provide Human Phenotype Ontology capabilities for phenotype-driven gene prioritization. ## Capabilities - HPO term matching - Gene-phenotype association scoring - Semantic similarity analysis - Phenotype-variant correlation - Exomiser integration - Prioritization reporting ## Usage Guidelines - Map clinical phenotypes to HPO terms - Calculate gene-phenotype associations - Use semantic similarity for ranking - Integrate with variant prioritization - Generate prioritization reports - Document phenotype encoding ## Dependencies - HPO - Exomiser - Phen2Gene ## Process Integration - Rare Disease Diagnostic Pipeline (rare-disease-diagnostics) - Clinical Variant Interpretation (clinical-variant-interpretation)
- Purpose
- Capabilities
- Usage Guidelines
- Dependencies
- Process Integration
What does the hpo-phenotype-matcher skill do?
Human Phenotype Ontology skill for phenotype-driven gene prioritization
How do I install it?
Run `npx skills add a5c-ai/babysitter --skill hpo-phenotype-matcher --agent claude-code` — it drops the skill into your project so the agent can pick it up. Swap the --agent value for codex, cursor or copilot if you use one of those.
Where does this skill come from?
From a5c-ai/babysitter, a repository with 1,642 stars. We read it straight from the repository tree rather than a submitted listing, so what you see here is what is actually published.
Is a popular skill a good skill?
Not necessarily. Stars measure attention, not adoption — a repository can trend for a week and be abandoned. That is why we show the weekly change from our own snapshots next to the total, instead of a single flattering number.