Agent skill · Data & Analytics

benchling-integration

Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.

LeonChaoXgithub.com/LeonChaoXGitHub ↗
claude-codeMIT
Install
npx skills add LeonChaoX/qinyan-academic-skills --skill benchling-integration --agent claude-code

Same command for any agent — swap --agent for codex, cursor, copilot.

Facts
Files in the skill folder: 4
SKILL.md size: 13 KB
Bundled scripts: none
Requires: Requires a Benchling account and API key
Path: skills/13-实验室自动化与集成/benchling-integration/SKILL.md
Open the folder on GitHub →
Where it comes from
Stars: 759
Language: Python

Weekly change comes from our own snapshots, not the repository page — it measures attention, not adoption.

From the SKILL.md

# Benchling Integration ## Overview Benchling is a cloud platform for life sciences R&D. Access registry entities (DNA, proteins), inventory, electronic lab notebooks, and workflows programmatically via Python SDK and REST API. ## When to Use This Skill This skill should be used when: - Working with Benchling's Python SDK or REST API - Managing biological sequences (DNA, RNA, proteins) and registry entities - Automating inventory operations (samples, containers, locations, transfers) - Creating or querying electronic lab notebook entries - Building workflow automations or Benchling Apps - Syncing data between Benchling and external systems - Querying the Benchling Data Warehouse for analytics - Setting up event-driven integrations with AWS EventBridge ## Core Capabilities ### 1. Authentication & Setup **Python SDK Installation:** ```python # Stable release uv pip install benchling-sdk # or with Poetry poetry add benchling-sdk ``` **Authentication Methods:** API Key Authentication (recommended for scripts): ```python from benchling_sdk.benchling import Benchling from benchling_sdk.auth.api_key_auth import ApiKeyAuth benchling = Benchling( url="https://your-tenant.benchling.com", aut

What's inside
Steps it walks through
  1. Overview
  2. When to Use This Skill
  3. Core Capabilities
  4. 1. Authentication & Setup
  5. 2. Registry & Entity Management
  6. 3. Inventory Management
  7. 4. Notebook & Documentation
  8. 5. Workflows & Automation
  9. 6. Events & Integration
  10. 7. Data Warehouse & Analytics
  11. Best Practices
  12. Error Handling
  13. Pagination Efficiency
  14. Schema Fields Helper
Ships with 3 files
  • references/api_endpoints.md
  • references/authentication.md
  • references/sdk_reference.md
More from qinyan-academic-skills
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About this skill
What does the benchling-integration skill do?

Benchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.

How do I install it?

Run `npx skills add LeonChaoX/qinyan-academic-skills --skill benchling-integration --agent claude-code` — it drops the skill into your project so the agent can pick it up. Swap the --agent value for codex, cursor or copilot if you use one of those.

Where does this skill come from?

From LeonChaoX/qinyan-academic-skills, a repository with 759 stars. We read it straight from the repository tree rather than a submitted listing, so what you see here is what is actually published.

Is a popular skill a good skill?

Not necessarily. Stars measure attention, not adoption — a repository can trend for a week and be abandoned. That is why we show the weekly change from our own snapshots next to the total, instead of a single flattering number.

Keep going